Publications

A complete list of scientific publications can be found in the following major online public servers and search engines:

NASA ADS

arXiv.org

Google Scholar

bioRxiv.org

Publications

2018 2017 2016 2015 2014 2013 2011 2010 2009 2007

2019

2019
21. A. Shahmoradi, R. J. Nemiroff (2019). A Catalog of Redshift Estimates for 1366 BATSE Long-Duration Gamma-Ray Bursts: Evidence for Strong Selection Effects on the Phenomenological Prompt Gamma-Ray Correlations. .
Links: PDF

2018

2018
20. E. A. B. F. Lima, A. Ozkan, N. Ghousifam, J. T. Oden, A. Shahmoradi, M. N. Rylander, B. Wohlmuth, and T. E. Yankeelov (2018). Calibration of Multi-Parameter Models of Avascular Tumor Growth Using Time Resolved Microscopy Data. Nature Scientific Reports.
Links: PDF
19. E. A. B. F. Lima, A. Ozkan, N. Ghousifam, J. T. Oden, A. Shahmoradi, M. N. Rylander, B. Wohlmuth, and T. E. Yankeelov (2018). Calibration of Multi-Parameter Models of Avascular Tumor Growth Using Time Resolved Microscopy Data. ICES Reports.
Links: PDF

2017

2017
18. A. Shahmoradi (2017). Multilevel Bayesian Parameter Estimation in the Presence of Model Inadequacy and Data Uncertainty. arXiv:1711.10599.
Links: PDF
17. A. Shahmoradi (2017). A Tutorial on Bayesian Parameter Estimation in the Presence of Model Inadequacy and Data Uncertainty. (draft).
Links: PDF
16. E.A.B.F. Lima, J.T. Oden, B. Wohlmuth, A. Shahmoradi, D.A. Hormuth, T.E. Yankeelov, L. Scarabosio, T. Horger (2017). Selection and validation of predictive models of radiation effects on tumor growth based on noninvasive imaging data. Computer Methods in Applied Mechanics and Engineering.
Links: PDF Google Scholar
doi: 10.1016/j.cma.2017.08.009

(doi)

2016

2016
15. R. Walker, P.E. Navas, S.H. Friedman, S. Galliani, A. Karolak, F. MacFarlane, R. Noble, J. Poleszczuk, S. Russell, K.A. Rejniak, A. Shahmoradi, F. Ziebell, J. Brayer, D. Abate-Daga, H. Enderling (2016). Enhancing synergy of CAR T cell therapy and oncolytic virus therapy for pancreatic cancer. Cold Spring Harbor Labs Journals.
Links: PDF Google Scholar bioRxiv
doi: 10.1101/055988

(doi)
14. A. Shahmoradi (2016). 101. You and Your Research: Hamming’s crash-course on career success. (opinion).
Links: PDF
13. A. Shahmoradi, C. O. Wilke (2016). Dissecting the roles of local packing density and longer-range effects in protein sequence evolution. Proteins: Structure, Function, and Bioinformatics.
Links: PDF NASA ADS Google Scholar arXiv bioRxiv
doi: 10.1002/prot.25034

(arXiv)

(doi)
12. E. L. Jackson, A. Shahmoradi, S. J. Spielman, B. R. Jack, C. O. Wilke (2016). Intermediate divergence levels maximize the strength of structure-sequence correlations. Protein Science.
Links: PDF Google Scholar
doi: 10.1002/pro.2920

(doi)

2015

2015
11. H. Luo, M. Delshad, Z. Li, A. Shahmoradi (2015). Numerical simulation of the impact of polymer rheology on polymer injectivity using a multilevel local grid refinement method. Petroleum Science.
Links: PDF Google Scholar
doi: 10.1007/s12182-015-0066-1

(doi)
10. A. Shahmoradi, R. J. Nemiroff (2015). Short versus long gamma-ray bursts: a comprehensive study of energetics and prompt gamma-ray correlations. Monthly Notices of the Royal Astronomical Society (MNRAS) 451:4645-4662.
Links: PDF NASA ADS Google Scholar arXiv
doi: 10.1093/mnras/stv714

(arXiv)

(doi)

2014

2014
9. A. Shahmoradi (2014). What every scientist needs to know. (opinion).
Links: PDF
8. A. Shahmoradi, D. K. Sydykova, S. J. Spielman, E. L. Jackson, E. T. Dawson, A. G. Meyer, C. O. Wilke (2014). Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design. Journal of Molecular Evolution (JME) 79:130–142.
Links:   PDF    NASA ADS    Google Scholar    arXiv    bioRxiv
doi: 10.1007/s00239-014-9644-x
pmcid: PMC4216736

(arXiv)

(doi)

2013

2013
7. A. Shahmoradi (2013). Gamma-Ray bursts: Energetics and Prompt Correlations. Stanford Conference Proceedings, C1304143, paper 14.
Links: PDF NASA ADS arXiv

(arXiv)
6. A. Shahmoradi (2013). A Multivariate Fit Luminosity Function and World Model for Long Gamma-Ray Bursts. The Astophysical Journal (ApJ) 766:111-133.
Links: PDF NASA ADS Google Scholar arXiv
doi: 10.1088/0004-637X/766/2/111

(arXiv)

(doi)

2011

2011
5. A. Shahmoradi, R. J. Nemiroff (2011). The possible impact of gamma-ray burst detector thresholds on cosmological standard candles. Monthly Notices of the Royal Astronomical Society (MNRAS) 411:1843-1856.
Links: PDF NASA ADS Google Scholar arXiv
doi: 10.1111/j.1365-2966.2010.17805.x

(arXiv)

(doi)

2010

2010
4. A. Shahmoradi, R. J. Nemiroff (2010). Hardness as a spectral peak estimator for gamma-ray bursts. Monthly Notices of the Royal Astronomical Society (MNRAS) 407:2075-2090.
Links: PDF NASA ADS Google Scholar arXiv
doi: 10.1111/j.1365-2966.2010.16793.x

(arXiv)

(doi)

2009

2009
3. A. Shahmoradi, R. J. Nemiroff (2009). How Real detector thresholds create false standard candles. American Institute of Physics (AIP) Conference Proceedings 1133:425-427.
Links: PDF NASA ADS Google Scholar
doi: 10.1063/1.3155940

(doi)
2. R. J. Nemiroff, A. Shahmoradi (2009). What Causes GRB Time Dilation?. American Institute of Physics (AIP) Conference Proceedings 1133:323-327.
Links: PDF NASA ADS Google Scholar
doi: 10.1063/1.3155911

(doi)

2007

2007
1. A. Shahmoradi, Mahmoud Bahmanabadi, Jalal Samimi (2007). On the Muon Content of Gamma-Ray-Initiated Extensive Air Showers. Proceedings of the 11^th National Conference on Astronomical Research.
Links: PDF

Presentations

2016 2015 2014 2013 2010 2009 2008

2017

2017
17. A. Shahmoradi. Invited Talk. Multilevel Bayesian Analysis of Data in the Presence of Model Inadequacy and Measurement Error. Institute for Computational Engineering and Sciences, University of Texas, Austin, Nov 10 2017.
PDF

2016

2016
16. A. Shahmoradi. Invited Talk. How Real Detector Thresholds Create False Standard Candles. Department of Physics, Sharif University of Technology, Tehran, May 1 2016.
PDF
15. A. Shahmoradi. Invited Talk. 101. You and Your Career: Hamming’s crash-course on career success. Department of Physics, Sharif University of Technology, Tehran, April 26 2016.
PDF
14. A. Shahmoradi. Invited Talk. How Real Detector Thresholds Create False Standard Candles. Cosmology Group, Department of Physics, Sharif University of Technology, Tehran, April 24 2016.
PDF
13. A. Shahmoradi. Invited Talk. What Every Scientist Needs to Know: Lessons Learned from the World of Cosmology. Department of Physics, Sharif University of Technology, Tehran, April 19 2016.
PDF

2015

2015
12. A. Shahmoradi. Contributed Talk. Dissecting the relationship between protein structure and sequence evolution. BEACON Congress, August 2015, Lansing, MI, USA.
PDF
11. A. Shahmoradi. Contributed Talk. Dissecting the relationship between protein structure and sequence variation. APS March Meeting, 2015, San Antonio, TX, USA.
PDF

2014

2014
10. A. Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, AG Meyer, CO Wilke. Contributed Talk. Structural Determinants of Protein Evolution. BEACON Congress, Aug 19 2014.
PDF
9. A. Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, AG Meyer, CO Wilke. Contributed Talk. Structural Determinants of Protein Evolution: buriedness vs. flexibility vs. design. SMBE Annual Meeting, June 10 2014, Puerto Rico, USA.
PDF
8. A. Shahmoradi. Contributed Talk. Classification and Energetics of Cosmological Gamma-Ray Bursts. APS April Meeting, April 2014, Savannah, GA.
PDF
7. A. Shahmoradi, R. J. Nemiroff. Contributed Talk. Classification and Energetics of Cosmological Gamma-Ray Bursts. 223rd American Astronomical Society Meeting, Washington, D.C., Janurary 5-9, 2014.
PDF

2013

2013
6. A. Shahmoradi, Wilke Lab at UT Austin. Contributed Talk. Insights into Protein Evolution via Molecular Dynamics Simulations. BEACON Congress, Aug 12-15, 2013, Lansing, MI, USA.
PDF
5. A. Shahmoradi. Contributed Poster. Gamma-Ray bursts: Energetics and Prompt Correlations. 7th Huntsville Gamma-Ray Burst Symposium, Nashville, TN, April 14-18, 2013.
PDF

2010

2010
4. A. Shahmoradi, R. J. Nemiroff. Contributed Talk. Gamma-Ray Bursts as Cosmological Tools. 10th Great Lakes Cosmology Workshop, Jun 2010, Chicago, IL, USA.
PDF
3. A. Shahmoradi. Invited Talk. Gamma-Ray Bursts as Cosmological Tools. Department of Physics, Michigan Tech University, Feb 2010, Houghton, MI, USA.
PDF

2009

2009
2. A. Shahmoradi. Invited Talk. Are Gamma-Ray Bursts Cosmological Standard Candles?. Department of Physics, Michigan Tech University, April 2009, Houghton, MI, USA.
PDF

2008

2008
1. A. Shahmoradi, R. J. Nemiroff. Contributed Talk. How Real Detector Thresholds Create False Standard Candles. 6th Huntsville Gamma-Ray Burst Symposium, Oct 2008, Huntsville, Al, USA.
PDF